plot_cpdb_dotplot: plot_cpdb_dotplot

In ddiez/scmisc: Miscellaneus Tools for the Analysis of Single Cell Data

plot_cpdb_dotplot

Description

Plot cellphonedb results as a dotplot.

Usage

plot_cpdb_dotplot(
  x,
  cutoff = 0.001,
  filter = NULL,
  cells = NULL,
  proteins = NULL,
  cluster_cells = FALSE,
  cluster_proteins = FALSE
)

Arguments

cutoff	cutoff for pvalues.
filter	filter for cell pairs using regular expression.
cells	subset cell pairs.
proteins	subset protein pairs.
cluster_cells	logical; whether to cluster cells.
cluster_proteins	logigcal; whether to cluster proteins.
path	path to the folder containing cellphonedb results.

ddiez/scmisc documentation built on July 21, 2024, 11:35 a.m.