filter_cells: filter_cells

In ddiez/scmisc: Miscellaneus Tools for the Analysis of Single Cell Data

filter_cells

Description

filter_cells

Usage

filter_cells(x, ...)

## S3 method for class 'SingleCellExperiment'
filter_cells(x, min.genes = 10, min.count = 0, assay.name = "counts", ...)

## S3 method for class 'matrix'
filter_cells(x, min.genes = 10, min.count = 0, ...)

Arguments

x	object to filter.
...	arguments passed down to methods.
min.genes	minimum number of genes with min.count for cell to be preserved.
min.count	minimum number of counts to be considered expressed.
assay.name	name of assay to obtain matrix of counts.

ddiez/scmisc documentation built on July 21, 2024, 11:35 a.m.