plot_jaccard: plot_jaccard

In ddiez/scmisc: Miscellaneus Tools for the Analysis of Single Cell Data

plot_jaccard

Description

Plot heatmap of jaccard index of specified columns.

Usage

plot_jaccard(x, ...)

## S3 method for class 'Seurat'
plot_jaccard(x, col.x, col.y, ...)

## S3 method for class 'SingleCellExperiment'
plot_jaccard(x, ...)

## S3 method for class 'DataFrame'
plot_jaccard(x, ...)

## S3 method for class 'data.frame'
plot_jaccard(x, col.x, col.y, label = FALSE, label.size = 5, drop = FALSE, ...)

Arguments

x	a suitable object.
...	parameters passed down to methods.
col.x	name of column to be use in x-axis.
col.y	name of column to be use in y-axis.
label	logical; whether to add rounded values of jaccard index to tiles.
label.size	size of labels text.
drop	whether to drop unused axis levels.

ddiez/scmisc documentation built on July 21, 2024, 11:35 a.m.