R/globals.R

In drieslab/Giotto_site_suite: Spatial Single-Cell Transcriptomics Toolbox

#' @import ggplot2
#' @import data.table
#' @import utils
utils::globalVariables(names = c(":=", ".N", ".SD", ".", "cast",
                                 "python_leiden", "python_louvain", "python_spatial_genes",
                                 "Spatial_DE_AEH", "Spatial_DE", "silhouette_rank",
                                 "python_scrublet", "python_create_mesmer_app",
                                 "python_segment_image","ad_guard","dir_guard","ad_obj",
                                 "lay_inv","set_adg_layer_data","set_adg_spat_locs",
                                 "set_adg_metadata","set_adg_pca","set_adg_umap",
                                 "set_adg_tsne","write_ad_h5ad","read_anndata_from_path",
                                 "extract_expression","extract_cell_IDs","extract_feat_IDs",
                                 "extract_pca","extract_umap","extract_tsne",
                                 "parse_obsm_for_spat_locs","extract_cell_metadata",
                                 "extract_feat_metadata","extract_layer_names",
                                 "extract_layered_data","set_adg_nn","find_NN_keys",
                                 "extract_NN_connectivities","extract_NN_distances",
                                 "extract_NN_info"))