plot_gsea.leadingedge.HCL.simple: Take a GSEA object and calculate an HCL between the leading...
In drmjc/metaGSEA: Meta-analysis of GSEA analyses, including intra- and inter-experiment comparisons
Description
Usage
Arguments
Value
Author(s)
See Also
View source: R/plot_gsea.leadingedge.HCL.R
Description
Take a GSEA object and calculate an HCL between the leading edge genes.
Don't worry about the fancy geneset renaming that plot_gsea.leadingedge.HCL
gives you.
Usage
1
2
plot_gsea.leadingedge.HCL.simple(x, main = "Leading edge similarities",
xlab = "", hclust.method = "complete", ...)
Arguments
x
a GSEA object
main
the plot title
xlab
the x label
hclust.method
the hierarchical clustering method. see hclust
...
further arguments passed to plclust.gsea
Value
none. creates an HCL dendrogram plot
Author(s)
Mark Cowley, 2009-09-01
See Also
plot_gsea.leadingedge.HCL plclust.gsea gsea.leadingedge.distance
drmjc/metaGSEA documentation built on Aug. 8, 2020, 1:53 p.m.
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Description Usage Arguments Value Author(s) See Also
View source: R/plot_gsea.leadingedge.HCL.R
Description
Take a GSEA object and calculate an HCL between the leading edge genes. Don't worry about the fancy geneset renaming that plot_gsea.leadingedge.HCL gives you.
Usage
1 2 | plot_gsea.leadingedge.HCL.simple(x, main = "Leading edge similarities",
xlab = "", hclust.method = "complete", ...)
|
Arguments
x |
a GSEA object |
main |
the plot title |
xlab |
the x label |
hclust.method |
the hierarchical clustering method. see |
... |
further arguments passed to |
Value
none. creates an HCL dendrogram plot
Author(s)
Mark Cowley, 2009-09-01
See Also
plot_gsea.leadingedge.HCL plclust.gsea gsea.leadingedge.distance
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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