View source: R/process_signature.R
one_signature | R Documentation |
Extracts a single gene signature from an ADAGE model.
one_signature(node_weight, geneID, side, HW_cutoff = 2.5)
node_weight |
a vector storing weight values of each gene to a node |
geneID |
gene identifiers correspond to the weight vector |
side |
character, "pos" or "neg" |
HW_cutoff |
number of standard deviations from mean in a node's weight distribution to be considered as high-weight (default to 2.5). |
a character vector storing genes in the signature defined by the weight vector and the side.
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