IrisSpatialFeatures-package: IrisSpatialFeatures: A package to extract spatial features...

Description Author(s)

Description

Iris reads the output of the PerkinElmer inForm software and calculates a variety of spatial statistics. In addition to simple counts, it can derive average nearest neighbors for each cell-type and interaction summary profiles for each celltype. These statistics are derived across images, both overall and regions of interest as defined by user defined masks.

Author(s)

Daniel Gusenleitner Daniel_Gusenleitner@dfci.harvard.edu


gusef/Iris documentation built on May 14, 2019, 2:42 p.m.