interaction_permutation_test: Calculate a permutation test result for nearest neighbors to...
In gusef/Iris: A package to extract spatial features based on multiplex IF images
Description
Usage
Arguments
Value
Examples
Description
Calculate a permutation test result for nearest neighbors to say for each sample to see
if the neighbor distance something seen under the null assumption
Usage
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interaction_permutation_test(x, permutations = 20, subset = NULL,
verbose = FALSE, ...)
## S4 method for signature 'ImageSet'
interaction_permutation_test(x, permutations, subset,
vebose)
Arguments
x
IrisSpatialFeatures ImageSet object that has had extract nearest neighbors run
permutations
Set to 100 by default
Value
data.frame of markers and distances
Examples
1
2
3
#loading pre-read dataset
dataset <- IrisSpatialFeatures_data
interaction_permutation_test(dataset)
gusef/Iris documentation built on May 14, 2019, 2:42 p.m.
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Description Usage Arguments Value Examples
Description
Calculate a permutation test result for nearest neighbors to say for each sample to see if the neighbor distance something seen under the null assumption
Usage
1 2 3 4 5 6 | interaction_permutation_test(x, permutations = 20, subset = NULL,
verbose = FALSE, ...)
## S4 method for signature 'ImageSet'
interaction_permutation_test(x, permutations, subset,
vebose)
|
Arguments
x |
IrisSpatialFeatures ImageSet object that has had extract nearest neighbors run |
permutations |
Set to 100 by default |
Value
data.frame of markers and distances
Examples
1 2 3 | #loading pre-read dataset
dataset <- IrisSpatialFeatures_data
interaction_permutation_test(dataset)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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