get_all_proximities: Get all proximity data for all cell-types in a sample

In gusef/Iris: A package to extract spatial features based on multiplex IF images

Description

Get all proximity data for all cell-types in a sample

Get all proximity data for all cell-types in a sample

Usage

get_all_proximities(x, ...)

## S4 method for signature 'ImageSet'
get_all_proximities(x)

get_all_proximities(x, ...)

## S4 method for signature 'ImageSet'
get_all_proximities(x)

Arguments

x	An IrisSpatialFeatures ImageSet object
...	Additional arguments
x	An IrisSpatialFeatures ImageSet object
...	Additional arguments

Value

all proximity data for cell-types

all proximity data for cell-types

Examples

#loading pre-read dataset
dataset <- IrisSpatialFeatures_data
get_all_proximities(dataset)


#loading pre-read dataset
dataset <- IrisSpatialFeatures_data
get_all_proximities(dataset)

gusef/Iris documentation built on May 14, 2019, 2:42 p.m.