multiple_proximity_sample_data_frame: Extract proximity for a range of distances. Pass an array of...

In gusef/Iris: A package to extract spatial features based on multiplex IF images

Description

Extract proximity for a range of distances. Pass an array of radii distances (in micrometers) to the function that would otherwise work like "proximity_sample_data_frame"

Usage

multiple_proximity_sample_data_frame(x, ...)

## S4 method for signature 'ImageSet'
multiple_proximity_sample_data_frame(x, radii = c(10, 20,
  40, 100, 200, 400, 1000))

Arguments

x	IrisSpatialFeatures ImageSet object
...	Additional arguments
radii	The array of distances to extract in microns.

Value

The proximial events for each cell

Examples

#loading pre-read dataset
dataset <- IrisSpatialFeatures_data
extract_proximity(dataset)

gusef/Iris documentation built on May 14, 2019, 2:42 p.m.