crest: Processed neural crest single-cell data
In hms-dbmi/crestree: Analysis of branching branching trajectories from single-cell data
Description
Usage
Format
Source
Description
A dataset containing normalized expression matrices, t-SNE embedding and clusters.
Usage
1
Format
A list of 6 items.
- fpm
normalized expression matrix
- wgm
matrix of expression levels adjusted for mean-variance trend
- wgwm
matrix of expression weights
- emb
2D t-SNE embedding
- clcol
cell colors of clusters
- nc.cells
a vector of neural crest cells. Other cells are neural tube cells.
- motmat
a matrix of target-TF scores
Source
hms-dbmi/crestree documentation built on July 11, 2019, 8:04 p.m.
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Description Usage Format Source
Description
A dataset containing normalized expression matrices, t-SNE embedding and clusters.
Usage
1 |
Format
A list of 6 items.
- fpm
normalized expression matrix
- wgm
matrix of expression levels adjusted for mean-variance trend
- wgwm
matrix of expression weights
- emb
2D t-SNE embedding
- clcol
cell colors of clusters
- nc.cells
a vector of neural crest cells. Other cells are neural tube cells.
- motmat
a matrix of target-TF scores
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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