bootstrap.ppt: Sample pptree objects using bootstrap
In hms-dbmi/crestree: Analysis of branching branching trajectories from single-cell data
Description
Usage
Arguments
Value
View source: R/crestree.functions.R
Description
Sample pptree objects using bootstrap
Usage
1
2
bootstrap.ppt(..., X, M = ncol(X), n.cores = parallel::detectCores()/2,
n.samples = n.cores, seed = NULL, replace = T)
Arguments
X
expression matrix of genes (rows) and cells (columns).
M
number of principal points of pptree.
n.samples
a number of seed samplings.
replace
sampling with replacement (logical).
Value
a list of pptree objects
hms-dbmi/crestree documentation built on July 11, 2019, 8:04 p.m.
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Description Usage Arguments Value
View source: R/crestree.functions.R
Description
Sample pptree objects using bootstrap
Usage
1 2 | bootstrap.ppt(..., X, M = ncol(X), n.cores = parallel::detectCores()/2,
n.samples = n.cores, seed = NULL, replace = T)
|
Arguments
X |
expression matrix of genes (rows) and cells (columns). |
M |
number of principal points of pptree. |
n.samples |
a number of seed samplings. |
replace |
sampling with replacement (logical). |
Value
a list of pptree objects
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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