loc.opt: Identify all local optima for a time series data

In hms-dbmi/crestree: Analysis of branching branching trajectories from single-cell data

Description

Identify all local optima for a time series data

Usage

loc.opt(series, cutoff = 0.1)

Arguments

series	- time series data
cutoff	- expression in local optimum should be on cutoff higher/lower than nearby local optima. This parameter allows to eliminate small local optimas that are likely artifacts

Value

data frame containing type of local optima (min/max) and time index.

hms-dbmi/crestree documentation built on July 11, 2019, 8:04 p.m.