fig.cors: Visualize patterns of local correlations in consequtive...

In hms-dbmi/crestree: Analysis of branching branching trajectories from single-cell data

Description

Visualize patterns of local correlations in consequtive windows.

Usage

fig.cors(cors, genesetA, genesetB, val = FALSE)

Arguments

cors	a list of local average correlations with fate-specific modules. Outcome of slide.cors function.
genesetA	a vector of fate-specific genes of bifurcation branch 1
genesetB	a vector of fate-specific genes of bifurcation branch 2
val	boolean, if show the degree of "repulsion" of fate-specific modules. FALSE by default.

Value

ggplot object visualising pattern of local correlations in consequtive windows.

hms-dbmi/crestree documentation built on July 11, 2019, 8:04 p.m.