API for kendomaniac/docker4seq
Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers

Global functions
bwa Man page Source code
bwaIndexUcsc Man page Source code
cascImpute Man page Source code
cascKoptimization Man page Source code
cascOutputReformat Man page Source code
cascSelFeatures Man page Source code
cascStep1 Man page Source code
cascStep2 Man page Source code
checkCountDepth Man page Source code
chipseq Man page Source code
chipseqCounts Man page Source code
counts2log Man page Source code
demultiplexing Man page Source code
dockerTest Man page Source code
downloadContainers Man page Source code
experimentPower Man page Source code
filterZeros Man page Source code
gatkDNA Man page Source code
mirnaCounts Man page Source code
mirnaCovar Man page Source code
pca Man page Source code
rnaseqCounts Man page Source code
rsemBw Man page Source code
rsemanno Man page Source code
rsemannoByGtf Man page Source code
rsemstar Man page Source code
rsemstarIndex Man page Source code
rsemstarUscsIndex Man page Source code
runDocker Man page Source code
sample2experiment Man page Source code
sampleSize Man page Source code
scnorm Man page Source code
skewer Man page Source code
star2steps Man page Source code
wrapperDeseq2 Man page Source code
kendomaniac/docker4seq documentation built on Oct. 22, 2017, 3:15 p.m.