Man pages for kgellatl/SignallingSingleCell
Network Analysis for single cell RNA sequencing Data (sc-RNASeq)

calc_libsizeCalculate Library Size
cluster_scCluster Single Cell
construct_ex_scConstruct Expression Set Class
dim_reduceDimension Reduction
flow_filterConstruct Expression Set Class
flow_svmFlow Support Vector Machine
id_markersID markers
norm_scNormalization
plot_densityPlot Density
plot_density_ridgePlot Density
plot_scatterCreate a Scatter Plot
plot_tsne_genetSNE Plot on a gene or genes
plot_tsne_metadatatSNE Plot on metadata
plot_violinThis will create a violin plot
pre_filterFilter Data
return_markersReturn markers
save_ggplotSave plot
search_geneSearch Gene
subset_ex_scThis will setset your expression set by some variable in...
subset_genesSubset Genes
kgellatl/SignallingSingleCell documentation built on April 25, 2018, 9:39 p.m.