analyze_rl_network: Identifies all R / L interactions
In kgellatl/SignallingSingleCell: Network Analysis for single cell RNA sequencing Data (sc-RNASeq)
Description
Usage
Arguments
Details
Examples
View source: R/analyze_rl_network.R
Description
This function will map all RL interactions
Usage
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analyze_rl_network(
input,
h = 8,
w = 8,
prefix = "",
mult = 1,
layout = FALSE,
subset = FALSE,
subset_on = "connected",
merge_singles = T,
cluster_type = "louvain"
)
Arguments
input
the input network from plot_rl_network
h
the height of images
w
the height of images
prefix
a character to be appended to start of file names
Details
This will use the calc_agg_bulk results to ID networks
Examples
1
ex_sc_example <- id_rl(input = ex_sc_example)
kgellatl/SignallingSingleCell documentation built on Dec. 29, 2021, 4:12 p.m.
R Package Documentation
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Description Usage Arguments Details Examples
View source: R/analyze_rl_network.R
Description
This function will map all RL interactions
Usage
1 2 3 4 5 6 7 8 9 10 11 12 | analyze_rl_network(
input,
h = 8,
w = 8,
prefix = "",
mult = 1,
layout = FALSE,
subset = FALSE,
subset_on = "connected",
merge_singles = T,
cluster_type = "louvain"
)
|
Arguments
input |
the input network from plot_rl_network |
h |
the height of images |
w |
the height of images |
prefix |
a character to be appended to start of file names |
Details
This will use the calc_agg_bulk results to ID networks
Examples
1 | ex_sc_example <- id_rl(input = ex_sc_example)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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