kgellatl/SignallingSingleCell
Network Analysis for single cell RNA sequencing Data (sc-RNASeq)

Package index
Search the kgellatl/SignallingSingleCell package
Functions
99
Source code
50
Man pages
50
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kgellatl/SignallingSingleCell: Network Analysis for single cell RNA sequencing Data (sc-RNASeq)
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API

API for kgellatl/SignallingSingleCell
Network Analysis for single cell RNA sequencing Data (sc-RNASeq)

Global functions
agg_gene Man page Source code
analyze_rl_network Man page Source code
build_rl_network Man page Source code
calc_agg_bulk Man page Source code
calc_genestats Man page Source code
calc_libsize Man page Source code
calc_rl_connections Man page Source code
cell_cor Man page Source code
cell_net Man page Source code
cluster_cell_net Man page Source code
cluster_sc Man page Source code
construct_ex_sc Man page Source code
construct_ex_sc_10x Man page Source code
detect_doublets Man page Source code
dim_reduce Man page Source code
edgeRDE Man page Source code
extract_communities Man page Source code
extract_nodes Man page Source code
filter_rl_network Man page Source code
findDEgenes Man page Source code
findDEmarkers Man page Source code
flow_filter Man page Source code
flow_svm Man page Source code
id_markers Man page Source code
id_rl Man page Source code
merge_ex_sc Man page Source code
norm_sc Man page Source code
plotViolin Man page Source code
plot_barplot Man page Source code
plot_density Man page Source code
plot_density_ridge Man page Source code
plot_dotplot Man page Source code
plot_gene_dots Man page Source code
plot_go_heatmap Man page Source code
plot_heatmap Man page Source code
plot_rl_summary Man page Source code
plot_scatter Man page Source code
plot_tsne_gene Man page Source code
plot_tsne_metadata Man page Source code
plot_violin Man page
plot_volcano Man page Source code
pre_filter Man page Source code
reduce_cell_net Man page Source code
return_agg_gene Man page Source code
return_markers Man page Source code
return_subset_genes Man page Source code
save_ggplot Man page Source code
search_gene Man page Source code
subset_ex_sc Man page Source code
subset_genes Man page Source code
kgellatl/SignallingSingleCell documentation built on Dec. 29, 2021, 4:12 p.m.

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