parseMarkerFile: Parse Marker File
In khodosevichlab/CellAnnotatoR: Automated marker-based cell type annotation
parseMarkerFile R Documentation
Parse Marker File
Description
read markers from the markup file
Usage
parseMarkerFile(path, is.text = FALSE)
Arguments
path
path to the markup file
Value
list of markers for each cell type. List elements have the following info:
expressed: vector of positive markers
not_expressed: vector of negative markers
parent: parent cell type ('"root"' if there is no parent)
khodosevichlab/CellAnnotatoR documentation built on June 29, 2022, 9:12 p.m.
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| parseMarkerFile | R Documentation |
Parse Marker File
Description
read markers from the markup file
Usage
parseMarkerFile(path, is.text = FALSE)
Arguments
path |
path to the markup file |
Value
list of markers for each cell type. List elements have the following info:
expressed: vector of positive markers
not_expressed: vector of negative markers
parent: parent cell type ('"root"' if there is no parent)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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