plotTypeMarkers | R Documentation |
plot markers for the specified 'cell.type'
plotTypeMarkers( embedding, count.matrix, cell.type, marker.list, show.legend = T, build.panel = T, n.col = NULL, n.row = NULL, title.size = 10, ... )
count.matrix |
gene expression matrix with genes by columns and cells by rows |
cell.type |
cell type for which the markers must be plotted |
marker.list |
list of markers per cell type. Can be obtained with 'parseMarkerFile' |
build.panel |
combine individual plots to a single panel |
n.col |
number of columns in the panel |
n.row |
number of rows in the panel |
title.size |
font size for title of individual plots. Used only if build.panel==T |
... |
Arguments passed on to |
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