plotGeneExpression: Plot gene expression on cell embedding

In khodosevichlab/CellAnnotatoR: Automated marker-based cell type annotation

Plot gene expression on cell embedding

Description

Plot gene expression on cell embedding

Usage

plotGeneExpression(
  genes,
  embedding,
  cm,
  build.panel = T,
  n.col = NULL,
  n.row = NULL,
  title.size = 12,
  ...
)

Arguments

genes	vector of gene names
embedding	cell embedding
cm	count matrix with genes as columns
build.panel	combine individual plots to a single panel
n.col	number of columns in the panel
n.row	number of rows in the panel
title.size	font size for title of individual plots. Used only if build.panel==T
...	Arguments passed on to conos::embeddingPlot

khodosevichlab/CellAnnotatoR documentation built on June 29, 2022, 9:12 p.m.