scoreClusterUncertaintyPerLevel: Score Cluster Uncertainty Per Level

In khodosevichlab/CellAnnotatoR: Automated marker-based cell type annotation

Score Cluster Uncertainty Per Level

Description

Score uncertainty for each cluster per level

Usage

scoreClusterUncertaintyPerLevel(cell.uncertainty.per.level, clusters)

Arguments

cell.uncertainty.per.level	uncertainty per cell per level. Can be obtained from 'scoreCellUncertaintyPerLevel'
clusters	vector with cluster label for each cell

Value

Uncertainty per level for each cluster

Examples

  score_info <- getMarkerScoreInfo(clf_data)
  unc_info <- scoreCellUncertaintyPerLevel(ann_by_level, score_info)
  unc_per_clust <- scoreClusterUncertaintyPerLevel(unc_info, clusters)

khodosevichlab/CellAnnotatoR documentation built on June 29, 2022, 9:12 p.m.