normalization.zscore.1: Per group zscore normalization of gene expression profiles

In minzheguo/SINCERA: An R implementation of SINCERA pipeline for processing single-cell RNA-seq data.

Description

Per group zscore normalization of gene expression profiles

Usage

normalization.zscore.1(ES, group.by = "GROUP", groups = NULL,
  verbose = TRUE)

Arguments

ES	(ExpressionSet) an ExpressionSet object containing the single cell RNA-seq data
group.by	(character) the name of the column that contains the sample information
groups	(character) samples for measuring abundancy
verbose	(logical) verbose the function output

Value

an ExpressionSet object with per-sample zscore normalized expression values

Note

This function is from SINCERA version a10242015. It will be upgraded soon.

minzheguo/SINCERA documentation built on Feb. 3, 2021, 2:31 p.m.