normalization.zscore: Performing zscore scaling of gene expression

In minzheguo/SINCERA: An R implementation of SINCERA pipeline for processing single-cell RNA-seq data.

Description

Perform global or per-sample zscore scaling of gene expression for cell cluster identification and expression pattern visualization

Usage

normalization.zscore(object, pergroup = TRUE, ...)

Arguments

object	A sincera object
pergroup	If true, performing per cell group scaling; otherwise, take all cells as from the same sample and perform scaling.

Value

An updated sincera object with scaled expression values, use getExpresssion function with scaled=TRUE to access the scaled expression

minzheguo/SINCERA documentation built on Feb. 3, 2021, 2:31 p.m.