signature.validation: Validating cell type signature using random subsampling mehod

In minzheguo/SINCERA: An R implementation of SINCERA pipeline for processing single-cell RNA-seq data.

Description

Validating cell type signature using random subsampling mehod

Usage

signature.validation(object, siggenes = NULL, pct = 0.2, repeats = 3, ...)

Arguments

object	A sincera object
siggenes	A data frame containing the . The first column of the data frame contains cell cluster information, while the second column contains the genes
pct	The percentage of cells to be used to construct testing set
repeats	The number of subsamplings

Value

An updated sincera object, use getSigValidation to access the validation results

minzheguo/SINCERA documentation built on Feb. 3, 2021, 2:31 p.m.