PlotNoiseModel: Visualize expression/dropout curve

In nukappa/seurat_v2: Seurat : R toolkit for single cell genomics

Description

Plot the probability of detection vs average expression of a gene.

Usage

PlotNoiseModel(object, cell.ids = c(1, 2), col.use = "black", lwd.use = 2,
  do.new = TRUE, x.lim = 10, ...)

Arguments

object	Seurat object
cell.ids	Cells to use
col.use	Color code or name
lwd.use	Line width for curve
do.new	Create a new plot (default) or add to existing
x.lim	Maximum value for X axis
...	Additional arguments to pass to lines function

Details

Assumes that this 'noise' model has been precomputed with CalcNoiseModels

Value

Returns no value, displays a plot

nukappa/seurat_v2 documentation built on May 24, 2019, 9:57 a.m.