wn_ig_tabToIgraph: convert a table to an igraph

In pcahan1/epoch: Dynamic GRN reconstruction from single cell RNA-Seq data

Description

convert a table to an igraph. This adds an nEnts vertex attribute to count the number of entities in the sub-net

Usage

wn_ig_tabToIgraph(
  grnTab,
  caoGenesRes,
  simplify = FALSE,
  directed = FALSE,
  weights = TRUE
)

Arguments

grnTab	table of TF, TF, maybe zscores, maybe correlations
caoGenesRes	result of running caoGenesRes data frame with gene peakTime, peakTimeRaw and epoch name
simplify	false
directed	FALSE,
weights	TRUE

Value

iGraph object

pcahan1/epoch documentation built on Feb. 14, 2022, 1:57 a.m.