meffil.add.featureset: Add a feature set.

View source: R/manifest.r

meffil.add.featuresetR Documentation

Add a feature set.

Description

Add a feature set.

Usage

meffil.add.featureset(name, features)

Arguments

name

Name of the new feature set.

features

A data frame listing and describing all features.

Value

Assuming that features contains a satisfactory set of columns, a new feature set is made available. Thus, name will be added to the vector returned by meffil.list.featuresets().

The features data frame must contain the following columns:

  • "name"character

  • "target"character

  • "type"values "i","ii" or "control"

  • "chromosome"values "chr0"-"chr22", "chrM", "chrX" or "chrY"

  • "position"integer

  • "gene.symbol"character,

  • "gene.accession"character,

  • "gene.region"character,

  • "cpg.island.name"character

  • "relation.to.island"character

  • "snp.exclude"logical


perishky/meffil documentation built on June 9, 2024, 5:59 p.m.