meffil.add.featureset: Add a feature set.

In perishky/meffil: Efficient algorithms for DNA methylation

Add a feature set.

Description

Add a feature set.

Usage

meffil.add.featureset(name, features)

Arguments

name	Name of the new feature set.
features	A data frame listing and describing all features.

Value

Assuming that features contains a satisfactory set of columns, a new feature set is made available. Thus, name will be added to the vector returned by meffil.list.featuresets().

The features data frame must contain the following columns:

• "name"character

• "target"character

• "type"values "i","ii" or "control"

• "chromosome"values "chr0"-"chr22", "chrM", "chrX" or "chrY"

• "position"integer

• "gene.symbol"character,

• "gene.accession"character,

• "gene.region"character,

• "cpg.island.name"character

• "relation.to.island"character

• "snp.exclude"logical

perishky/meffil documentation built on March 20, 2024, 1:56 a.m.