meffil.ewas.cpg.plot: Scatter plots for a CpG site in an EWAS
In perishky/meffil: Efficient algorithms for DNA methylation
meffil.ewas.cpg.plot R Documentation
Scatter plots for a CpG site in an EWAS
Description
Scatter plots for a CpG site in an EWAS
Usage
meffil.ewas.cpg.plot(ewas.object, cpg, beta, title = cpg)
Arguments
ewas.object
Return object from meffil.ewas().
cpg
CpG site to plot.
beta
Matrix of methylation levels used to create the ewas.object.
title
Title of the plot (Default: cpg).
ggplot
object showing the scatterplots of DNA methylation vs the variable of interest
in the EWAS. Each plot corresponds to a covariate set.
Methylation levels are in fact residuals from fitting a model with DNA methylation and the covariates.
perishky/meffil documentation built on March 20, 2024, 1:56 a.m.
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| meffil.ewas.cpg.plot | R Documentation |
Scatter plots for a CpG site in an EWAS
Description
Scatter plots for a CpG site in an EWAS
Usage
meffil.ewas.cpg.plot(ewas.object, cpg, beta, title = cpg)
Arguments
ewas.object |
Return object from |
cpg |
CpG site to plot. |
beta |
Matrix of methylation levels used to create the |
title |
Title of the plot (Default: |
ggplot |
object showing the scatterplots of DNA methylation vs the variable of interest in the EWAS. Each plot corresponds to a covariate set. Methylation levels are in fact residuals from fitting a model with DNA methylation and the covariates. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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