meffil.ewas.cpg.plot: Scatter plots for a CpG site in an EWAS

In perishky/meffil: Efficient algorithms for DNA methylation

Scatter plots for a CpG site in an EWAS

Description

Scatter plots for a CpG site in an EWAS

Usage

meffil.ewas.cpg.plot(ewas.object, cpg, beta, title = cpg)

Arguments

ewas.object	Return object from meffil.ewas().
cpg	CpG site to plot.
beta	Matrix of methylation levels used to create the ewas.object.
title	Title of the plot (Default: cpg).
ggplot	object showing the scatterplots of DNA methylation vs the variable of interest in the EWAS. Each plot corresponds to a covariate set. Methylation levels are in fact residuals from fitting a model with DNA methylation and the covariates.

perishky/meffil documentation built on June 9, 2024, 5:59 p.m.