meffil.basenames: IDAT file basenames

View source: R/basenames.r

meffil.basenamesR Documentation

IDAT file basenames

Description

List IDAT file basenames in a given directory.

Usage

meffil.basenames(path, recursive = FALSE)

Arguments

path

Directory containing the IDAT files.

recursive

If TRUE, search for IDAT files in subdirectories as well (Default: FALSE).

Value

Character vector of IDAT file basenames (i.e. filenames with "_Grn.idat" and "_Red.idat" removed). In other words, each identifies the Cy5 and Cy3 output files corresponding to a single microarray.


perishky/meffil documentation built on June 9, 2024, 5:59 p.m.