meffil.get.beta: Infinium HumanMethylation450 BeadChip methylation levels

View source: R/get-beta.r

meffil.get.betaR Documentation

Infinium HumanMethylation450 BeadChip methylation levels

Description

Compute beta values (methylation levels) from methylated/unmethylated signals

Usage

meffil.get.beta(M, U, pseudo = 100)

Arguments

M

Methylated signal matrix.

U

Unmethylated signal matrix.

pseudo

Value to add to the denominator to make the methylation estimate more stable.

Value

Matrix of 0..1 methylation level estimates. Equal to methylated/(methylated + unmethylated + pseudo).


perishky/meffil documentation built on June 9, 2024, 5:59 p.m.