meffil.get.beta: Infinium HumanMethylation450 BeadChip methylation levels
In perishky/meffil: Efficient algorithms for DNA methylation
meffil.get.beta R Documentation
Infinium HumanMethylation450 BeadChip methylation levels
Description
Compute beta values (methylation levels) from methylated/unmethylated signals
Usage
meffil.get.beta(M, U, pseudo = 100)
Arguments
M
Methylated signal matrix.
U
Unmethylated signal matrix.
pseudo
Value to add to the denominator to make the methylation estimate more stable.
Value
Matrix of 0..1 methylation level estimates.
Equal to methylated/(methylated + unmethylated + pseudo).
perishky/meffil documentation built on March 20, 2024, 1:56 a.m.
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| meffil.get.beta | R Documentation |
Infinium HumanMethylation450 BeadChip methylation levels
Description
Compute beta values (methylation levels) from methylated/unmethylated signals
Usage
meffil.get.beta(M, U, pseudo = 100)
Arguments
M |
Methylated signal matrix. |
U |
Unmethylated signal matrix. |
pseudo |
Value to add to the denominator to make the methylation estimate more stable. |
Value
Matrix of 0..1 methylation level estimates. Equal to methylated/(methylated + unmethylated + pseudo).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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