meffil.ewas.report: Generate EWAS report.

In perishky/meffil: Efficient algorithms for DNA methylation

Generate EWAS report.

Description

Generate HTML file that summarises the EWAS.

Usage

meffil.ewas.report(
  ewas.summary,
  output.file = "ewas-report.html",
  author = "Analyst",
  study = "Illumina methylation data",
  ...
)

Arguments

ewas.summary	Output from meffil.ewas.summary.
output.file	Default = "ewas-report.html". If the file extension is not .htm, .html, .HTM or .HTML then output will be in markdown format.
author	Default = "Analyst". Author name to be specified on report.
study	Default = "Illumina methylation data". Study name to be specified on report.
...	Arguments to be passed to knitr::knit

perishky/meffil documentation built on March 20, 2024, 1:56 a.m.