meffil.cell.count.qc.plots: Cell count estimate quality plot

View source: R/cell-count-qc-plots.r

meffil.cell.count.qc.plotsR Documentation

Cell count estimate quality plot

Description

Cell count estimate quality plot

Usage

meffil.cell.count.qc.plots(count.objects)

Arguments

count.objects

A list of objects each obtained from meffil.estimate.cell.counts().

Value

Two ggplot2 boxplot objects:

  • betas Contains one box per sample or reference cell type representing the distribution of methylation levels for the CpG sites used to estimate cell counts.

  • counts Contains one box per reference cell type representing the distribution of cell count estimates across the samples.


perishky/meffil documentation built on June 9, 2024, 5:59 p.m.