meffil.cell.count.qc.plots: Cell count estimate quality plot
In perishky/meffil: Efficient algorithms for DNA methylation
View source: R/cell-count-qc-plots.r
meffil.cell.count.qc.plots R Documentation
Cell count estimate quality plot
Description
Cell count estimate quality plot
Usage
meffil.cell.count.qc.plots(count.objects)
Arguments
count.objects
A list of objects each obtained from
meffil.estimate.cell.counts().
Value
Two ggplot2 boxplot objects:
-
betas Contains one box per sample or reference cell type
representing the distribution of methylation levels for the CpG sites used to
estimate cell counts.
-
counts Contains one box per reference cell type
representing the distribution of cell count estimates across the samples.
perishky/meffil documentation built on March 20, 2024, 1:56 a.m.
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View source: R/cell-count-qc-plots.r
| meffil.cell.count.qc.plots | R Documentation |
Cell count estimate quality plot
Description
Cell count estimate quality plot
Usage
meffil.cell.count.qc.plots(count.objects)
Arguments
count.objects |
A list of objects each obtained from
|
Value
Two ggplot2 boxplot objects:
-
betasContains one box per sample or reference cell type representing the distribution of methylation levels for the CpG sites used to estimate cell counts. -
countsContains one box per reference cell type representing the distribution of cell count estimates across the samples.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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