meffil.list.featuresets: List of feature sets available.

View source: R/manifest.r

meffil.list.featuresetsR Documentation

List of feature sets available.

Description

Sets of features for individual platforms (e.g. "450k" for the Illumina HumanMethylation450 Beadchip) as well as for mixed platforms (e.g. "450k:epic:epic2" for combinations of Illumina HumanMethylation450, MethylationEPIC and MethylationEPICv2).

Usage

meffil.list.featuresets()

Details

In most cases, a feature corresponds to the two probes from which it's value is derived. Each CpG represented on the chip for example corresponds to a single feature derived from a probe measuring methylated signal and a second probe measuring unmethylated signal.

Each control feature corresponds to a unique control probe.


perishky/meffil documentation built on June 9, 2024, 5:59 p.m.