SequencingSummaryExtractRuntime: from sequencing_summary.txt return integer describing runtime...
In sagrudd/nanopoRe: Accessory Methods for the Analysis of Oxford Nanopore Technologies DNA Sequence Data
Description
Usage
Arguments
Value
Examples
View source: R/SequencingSummary.R
Description
from provided sequencing_summary.txt file return an integer best describing
the runtime in hours
Usage
1
SequencingSummaryExtractRuntime(seqsum = NA)
Arguments
seqsum
is the data.frame object as prepared by importSequencingSummary
Value
integer of runtime in hours
Examples
1
2
3
4
5
init()
seqsumFile <- system.file("extdata",
"sequencing_summary.txt.bz2", package = "nanopoRe")
importSequencingSummary(seqsumFile)
SequencingSummaryExtractRuntime()
sagrudd/nanopoRe documentation built on June 7, 2020, 10:20 p.m.
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Description Usage Arguments Value Examples
View source: R/SequencingSummary.R
Description
from provided sequencing_summary.txt file return an integer best describing the runtime in hours
Usage
1 | SequencingSummaryExtractRuntime(seqsum = NA)
|
Arguments
seqsum |
is the data.frame object as prepared by importSequencingSummary |
Value
integer of runtime in hours
Examples
1 2 3 4 5 | init()
seqsumFile <- system.file("extdata",
"sequencing_summary.txt.bz2", package = "nanopoRe")
importSequencingSummary(seqsumFile)
SequencingSummaryExtractRuntime()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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