setCachedYAMLValue: update the stored parameter value from named config field
In sagrudd/nanopoRe: Accessory Methods for the Analysis of Oxford Nanopore Technologies DNA Sequence Data
Description
Usage
Arguments
Value
Examples
Description
update the stored parameter value from named config field
Usage
1
setCachedYAMLValue(yaml = "config", field, value, subenv = NULL)
Arguments
yaml
the name of the YAML object
field
the parameter field to lookup
value
to value to update
subenv
the sub-environment to process
Value
TRUE or FALSE if the change can be made
Examples
1
2
3
4
5
6
7
init()
yamlFile <- system.file("extdata", "cas9_demo.yaml", package = "nanopoRe")
importConfigYAML(yamlFile=yamlFile)
referenceGenome <- system.file("extdata", "cas9_demo_ref.fasta",
package = "nanopoRe")
setCachedYAMLValue(field="reference_genome", value=referenceGenome)
getCachedYAMLValue(field="reference_genome")
sagrudd/nanopoRe documentation built on June 7, 2020, 10:20 p.m.
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Description Usage Arguments Value Examples
Description
update the stored parameter value from named config field
Usage
1 | setCachedYAMLValue(yaml = "config", field, value, subenv = NULL)
|
Arguments
yaml |
the name of the YAML object |
field |
the parameter field to lookup |
value |
to value to update |
subenv |
the sub-environment to process |
Value
TRUE or FALSE if the change can be made
Examples
1 2 3 4 5 6 7 | init()
yamlFile <- system.file("extdata", "cas9_demo.yaml", package = "nanopoRe")
importConfigYAML(yamlFile=yamlFile)
referenceGenome <- system.file("extdata", "cas9_demo_ref.fasta",
package = "nanopoRe")
setCachedYAMLValue(field="reference_genome", value=referenceGenome)
getCachedYAMLValue(field="reference_genome")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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