calculate_prevalence: Calculate taxon prevalence

Description Usage Arguments Author(s)

View source: R/calculate_prevalence.r

Description

Calculates the prevalence of each taxon overall or by some grouping factor.

Usage

1
calculate_prevalence(Dat, thres = 1, group = NULL)

Arguments

Dat

a dataset object

thres

Minimum number of reads for a taxon in a sample to be counted as present.

group

A grouping variable

Author(s)

Sur Herrera Paredes


surh/HMVAR documentation built on Aug. 18, 2021, 1:21 a.m.