get_sequence_fragment: Get sequence fragment
In surh/HMVAR: Human Microbiome Variant Analysis in R
Description
Usage
Arguments
Value
Description
Internal. Simple wrapper for getFrag
Usage
1
get_sequence_fragment(seq, ref_id, start, end)
Arguments
seq
A sequence fasta object from seqinr
ref_id
The sequence ID from the fragment,
start
1-indexed start position.
end
1-indexed end position (included in fragment).
Value
A character vector
surh/HMVAR documentation built on Aug. 18, 2021, 1:21 a.m.
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Description Usage Arguments Value
Description
Internal. Simple wrapper for getFrag
Usage
1 | get_sequence_fragment(seq, ref_id, start, end)
|
Arguments
seq |
A sequence fasta object from seqinr |
ref_id |
The sequence ID from the fragment, |
start |
1-indexed start position. |
end |
1-indexed end position (included in fragment). |
Value
A character vector
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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