format_input_hmqcp: Read HMQCP input
In surh/HMVAR: Human Microbiome Variant Analysis in R
Description
Usage
Arguments
Author(s)
Description
Reads QIIME outputs from HMP files of HMQCP dataset.
and produces a genus level dataset for the fgour body sites
of interest.
Usage
1
format_input_hmqcp(name, counts_file, map_file, collapse_level = 6)
Arguments
name
name (not used anymore?)
counts_file
counts file
map_file
map file
collapse_level
collapse level
Author(s)
Sur Herrera Paredes
surh/HMVAR documentation built on Aug. 18, 2021, 1:21 a.m.
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Description Usage Arguments Author(s)
Description
Reads QIIME outputs from HMP files of HMQCP dataset. and produces a genus level dataset for the fgour body sites of interest.
Usage
1 | format_input_hmqcp(name, counts_file, map_file, collapse_level = 6)
|
Arguments
name |
name (not used anymore?) |
counts_file |
counts file |
map_file |
map file |
collapse_level |
collapse level |
Author(s)
Sur Herrera Paredes
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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