subsetByGenes: Get a new ReadCountSet with specified gene IDs.
In SeqGSEA: Gene Set Enrichment Analysis (GSEA) of RNA-Seq Data: integrating differential expression and splicing
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Get a new ReadCountSet with specified gene IDs.
Usage
1
subsetByGenes(RCS, genes)
Arguments
RCS
a ReadCountSet object.
genes
a list of gene IDS.
Value
This function returns a new ReadCountSet object, with changes in slots assayData, featureData, featureData_gene, and permute_NBstat_exon and permute_NBstat_gene if they have been calculated.
Author(s)
Xi Wang, xi.wang@newcastle.edu.au
See Also
Examples
1
2
3
4
5
data(RCS_example, package="SeqGSEA")
RCS_example
genes <- c("ENSG00000000938", "ENSG00000000005")
RCS_sub <- subsetByGenes(RCS_example, genes)
RCS_sub
SeqGSEA documentation built on Nov. 8, 2020, 5:46 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Get a new ReadCountSet with specified gene IDs.
Usage
1 | subsetByGenes(RCS, genes)
|
Arguments
RCS |
a ReadCountSet object. |
genes |
a list of gene IDS. |
Value
This function returns a new ReadCountSet object, with changes in slots assayData, featureData, featureData_gene, and permute_NBstat_exon and permute_NBstat_gene if they have been calculated.
Author(s)
Xi Wang, xi.wang@newcastle.edu.au
See Also
Examples
1 2 3 4 5 | data(RCS_example, package="SeqGSEA")
RCS_example
genes <- c("ENSG00000000938", "ENSG00000000005")
RCS_sub <- subsetByGenes(RCS_example, genes)
RCS_sub
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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