GO_SS-class: GO_SS class object definition.
In ViSEAGO: ViSEAGO: a Bioconductor package for clustering biological functions using Gene Ontology and semantic similarity
Description
This class is invoked by build_GO_SS method in order to store enrich_GO_terms-class object, Information Content (IC),
and GO terms or groups distances objects based on semantic similarity.
Slots
ontontology used "MF", "BP", or "CC".
enrich_GOsmerge_enrich_terms output object (enrich_GO_terms-class object).
ICInformation Content (IC)
terms_distlist of GO terms or groups distances objects based on semantic similarity.
See Also
Other GO_semantic_similarity:
build_GO_SS(),
compute_SS_distances()
ViSEAGO documentation built on Nov. 8, 2020, 6:51 p.m.
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Description
This class is invoked by build_GO_SS method in order to store enrich_GO_terms-class object, Information Content (IC),
and GO terms or groups distances objects based on semantic similarity.
Slots
ontontology used "MF", "BP", or "CC".
enrich_GOsmerge_enrich_termsoutput object (enrich_GO_terms-classobject).ICInformation Content (IC)
terms_distlistof GO terms or groups distances objects based on semantic similarity.
See Also
Other GO_semantic_similarity:
build_GO_SS(),
compute_SS_distances()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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