gene2GO-class: gene2GO class object definition.
In ViSEAGO: ViSEAGO: a Bioconductor package for clustering biological functions using Gene Ontology and semantic similarity
Description
This class is invoked by annotate method in order to store GO annotations for each category (MF, BP, CC).
Slots
dbdatabase source in character.
stampdate of stamp in character.
organismtarget species GO annotation in character.
MFa list containing GO terms for Molecular Function (MF) category for each gene element.
BPa list containing GO terms for Biological Process (BP) category for each gene element.
CCa list containing GO terms for Cellular Component (CC) category for each gene element.
See Also
Other GO_terms:
GOcount(),
GOterms_heatmap(),
annotate(),
create_topGOdata(),
merge_enrich_terms(),
runfgsea()
ViSEAGO documentation built on Nov. 8, 2020, 6:51 p.m.
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Description
This class is invoked by annotate method in order to store GO annotations for each category (MF, BP, CC).
Slots
dbdatabase source in
character.stampdate of stamp in
character.organismtarget species GO annotation in
character.MFa
listcontaining GO terms for Molecular Function (MF) category for each gene element.BPa
listcontaining GO terms for Biological Process (BP) category for each gene element.CCa
listcontaining GO terms for Cellular Component (CC) category for each gene element.
See Also
Other GO_terms:
GOcount(),
GOterms_heatmap(),
annotate(),
create_topGOdata(),
merge_enrich_terms(),
runfgsea()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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