numericalDNA: Conversion of nucleotides to numerical vectors
In MEET: MEET: Motif Elements Estimation Toolkit
Description
Usage
Arguments
Author(s)
References
See Also
Examples
Description
Convert a nucleotide to a numerical vector, using a representation where each nucleotide is placed at the vertex of a regular tetrahedron.
Usage
1
numericalDNA(background)
Arguments
background
Corresponding point in the tetrahedron of the
input nucleotide
Author(s)
Erola Pairo <epeiroatibec.pcb.ub.es>
References
Silverman, B.D., and Linske, R.: A measure of DNA periodicity, Journal of Theoretical Biology 118, volume 118, 295-300, 1986
See Also
convertDNA
Examples
1
2
3
require("MEET")
background<-c(0.25, 0.25, 0.25, 0.25)
numericA<-numericalDNA(background)
MEET documentation built on May 2, 2019, 1:45 p.m.
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Description Usage Arguments Author(s) References See Also Examples
Description
Convert a nucleotide to a numerical vector, using a representation where each nucleotide is placed at the vertex of a regular tetrahedron.
Usage
1 | numericalDNA(background)
|
Arguments
background |
Corresponding point in the tetrahedron of the input nucleotide |
Author(s)
Erola Pairo <epeiroatibec.pcb.ub.es>
References
Silverman, B.D., and Linske, R.: A measure of DNA periodicity, Journal of Theoretical Biology 118, volume 118, 295-300, 1986
See Also
convertDNA
Examples
1 2 3 | require("MEET")
background<-c(0.25, 0.25, 0.25, 0.25)
numericA<-numericalDNA(background)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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