View source: R/get_collapsed_gene_model_exon.R
get_collapsed_gene_model_exon | R Documentation |
This service returns the collapsed exons in the gene model of the given gene. Gene-level and exon-level expression quantification were based on the GENCODE annotation, collapsed to a single transcript model for each gene using an algorithm developed by the GTEx analysis team.
By default, this service queries the models used by the latest GTEx release.
get_collapsed_gene_model_exon(
gencodeId,
datasetId = "gtex_v8",
page = 0,
itemsPerPage = 250
)
gencodeId |
String. A Versioned GENCODE ID of a gene, e.g. "ENSG00000065613.9". |
datasetId |
String. Unique identifier of a dataset. Usually includes a data source and data release. Options: "gtex_v8", "gtex_snrnaseq_pilot". |
page |
Integer (default = 0). |
itemsPerPage |
Integer (default = 250). |
A tibble
Other Datasets Endpoints:
get_annotation()
,
get_downloads_page_data()
,
get_file_list()
,
get_full_get_collapsed_gene_model_exon()
,
get_functional_annotation()
,
get_linkage_disequilibrium_by_variant_data()
,
get_linkage_disequilibrium_data()
,
get_sample_datasets_endpoints()
,
get_subject()
,
get_tissue_site_detail()
,
get_variant()
,
get_variant_by_location()
## Not run:
get_collapsed_gene_model_exon(gencodeId = "ENSG00000132693.12")
## End(Not run)
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