View source: R/get_file_list.R
get_file_list | R Documentation |
Get all the files in GTEx dataset for Download page
get_file_list()
The returned tibble includes a nested list column, "filesets". This details files, sub-categorised by fileset (see examples section).
A tibble
Other Datasets Endpoints:
get_annotation()
,
get_collapsed_gene_model_exon()
,
get_downloads_page_data()
,
get_full_get_collapsed_gene_model_exon()
,
get_functional_annotation()
,
get_linkage_disequilibrium_by_variant_data()
,
get_linkage_disequilibrium_data()
,
get_sample_datasets_endpoints()
,
get_subject()
,
get_tissue_site_detail()
,
get_variant()
,
get_variant_by_location()
## Not run:
# Column "filesets" is a list column
get_file_list()
# Get "GTEx Analysis V9" file list
gtex_v9_files <- get_file_list() |>
dplyr::filter(name == "GTEx Analysis V9") |>
dplyr::pull(filesets)
# "GTEx Analysis V9" filesets
names(gtex_v9_files[[1]])
# "GTEx Analysis V9", "snRNA-Seq Data" fileset files
names(gtex_v9_files[[1]][["snRNA-Seq Data"]]$files)
## End(Not run)
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