View source: R/get_single_nucleus_gex_summary.R
get_single_nucleus_gex_summary | R Documentation |
Retrieve Summarized Single Nucleus Gene Expression Data.
get_single_nucleus_gex_summary(
datasetId = "gtex_snrnaseq_pilot",
tissueSiteDetailIds = NULL,
page = 0,
itemsPerPage = 250
)
datasetId |
String. Unique identifier of a dataset. Usually includes a data source and data release. Options: "gtex_v8", "gtex_snrnaseq_pilot". |
tissueSiteDetailIds |
Character vector of IDs for tissues of interest.
Can be GTEx specific IDs (e.g. "Whole_Blood"; use
|
page |
Integer (default = 0). |
itemsPerPage |
Integer (default = 250). |
A tibble.
Other Expression Data Endpoints:
get_clustered_median_exon_expression()
,
get_clustered_median_gene_expression()
,
get_clustered_median_junction_expression()
,
get_clustered_median_transcript_expression()
,
get_expression_pca()
,
get_gene_expression()
,
get_median_exon_expression()
,
get_median_gene_expression()
,
get_median_junction_expression()
,
get_median_transcript_expression()
,
get_single_nucleus_gex()
,
get_top_expressed_genes()
## Not run:
# all tissues
get_single_nucleus_gex_summary()
# filter for specific tissue
get_single_nucleus_gex_summary(tissueSiteDetailIds = c("Breast_Mammary_Tissue",
"Skin_Sun_Exposed_Lower_leg"))
## End(Not run)
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