ClusterCODEX: Perform louvain clustering on CODEX data
In CamaraLab/STvEA: Spatially-resolved Transcriptomics via Epitope Anchoring
ClusterCODEX R Documentation
Perform louvain clustering on CODEX data
Description
Perform louvain clustering on CODEX data
Usage
ClusterCODEX(stvea_object, k = NULL)
Arguments
stvea_object
STvEA.data class object with KNN matrix for CODEX protein space
k
number of nearest neighbors to use in graph-based clustering
If NULL, will use all nearest neighbors from the KNN matrix.
CamaraLab/STvEA documentation built on April 2, 2024, 6:07 a.m.
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| ClusterCODEX | R Documentation |
Perform louvain clustering on CODEX data
Description
Perform louvain clustering on CODEX data
Usage
ClusterCODEX(stvea_object, k = NULL)
Arguments
stvea_object |
STvEA.data class object with KNN matrix for CODEX protein space |
k |
number of nearest neighbors to use in graph-based clustering If NULL, will use all nearest neighbors from the KNN matrix. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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