KnnCODEX: Get k nearest neighbors for CODEX protein space. If...

View source: R/clustering.R

KnnCODEXR Documentation

Get k nearest neighbors for CODEX protein space. If CleanCODEX has been run, uses cleaned CODEX protein data, otherwise uses original CODEX protein data.

Description

Get k nearest neighbors for CODEX protein space. If CleanCODEX has been run, uses cleaned CODEX protein data, otherwise uses original CODEX protein data.

Usage

KnnCODEX(stvea_object, k = 5)

Arguments

stvea_object

STvEA.data class object with CODEX protein data

k

number of nearest neighbors to find


CamaraLab/STvEA documentation built on April 2, 2024, 6:07 a.m.