View source: R/data_processing.R
FilterCITEmRNA.internal | R Documentation |
Filter CITE-seq mRNA data based on number of transcripts per cell and the number of cells each gene is expressed in Takes matrices and data frames instead of STvEA.data class
FilterCITEmRNA.internal(
cite_mRNA,
min_transcripts = 1200,
min_cells_per_gene = 30
)
cite_mRNA |
a (cell x gene) matrix of CITE-seq mRNA data |
min_transcripts |
minimum number of transcripts to keep cell |
min_cells_per_gene |
minimum number of cells a gene must be expressed in to be kept |
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