CorNN: Find the knn indices in data for all cells in query using...
In CamaraLab/STvEA: Spatially-resolved Transcriptomics via Epitope Anchoring
CorNN R Documentation
Find the knn indices in data for all cells in query
using Pearson's correlation dissimilarity
Description
Note: "query" here is used to mimic RANN documentation, not Seurat documentation
Usage
CorNN(data, query = data, k = 5)
Arguments
data
a (M cell x d feature) matrix
query
a (N cell x d feature) matrix. If not specified, query = data.
k
number of nearest neighbors to find
Value
a N x k matrix containing nearest neighbors for each cell in query
CamaraLab/STvEA documentation built on April 2, 2024, 6:07 a.m.
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| CorNN | R Documentation |
Find the knn indices in data for all cells in query using Pearson's correlation dissimilarity
Description
Note: "query" here is used to mimic RANN documentation, not Seurat documentation
Usage
CorNN(data, query = data, k = 5)
Arguments
data |
a (M cell x d feature) matrix |
query |
a (N cell x d feature) matrix. If not specified, query = data. |
k |
number of nearest neighbors to find |
Value
a N x k matrix containing nearest neighbors for each cell in query
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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